Declan Morrissey's Voyage to the Bottom of the Sea /AKA CE17008 Exploiting and Conserving Deep-Sea Genetic Resources

Declan joined this Science Foundation of Ireland Survey for Training Through Research Surveys at the invitation of Scientist in Charge Dr Louise Allcock of NUI Galway on the RV Celtic Explorer.  

Deep-sea Exploration: Into the Unknown
My name is Declan Morrissey. I am a recent graduate from Marine Science in NUIG. Currently, I am aboard the RV Celtic Explorer participating in a deep-sea ROV cruise as part of the Strategic Marine Alliance for Research and Training (SMART) Trainingthrough Research Surveys (TTRS) programme.  The purpose of this cruise is biodiscovery - that is to find novel natural compounds that may have the potential to be used in the treatment of disease and illnesses. The expedition is a part of a 5 year project "Exploiting and conserving deep-sea genetic resources” funded by Science Foundation Ireland and the Marine Institute.

This cruise requires the use of Ireland’s ROV Holland I. This ROV has a depth rating of 3000 m. This amazing piece of equipment allows us to peak into the secretive world of the deep sea. Here, we have colonies of Lophelia pertusa, a dominant reef-building coral of the North-East Atlantic. This coral provides an elevated position and hard substrate for other fauna to attach. This is highly advantageous for filter feeders. Corals can also attach to steep surfaces of seamounts and canyon walls where Lophelia reefs are either absent or do not provide enough surface area for all the life. It is estimated that worldwide cold-water corals have the same abundance and distribution as their shallow water counterparts (284,000km2) and the same associated biodiversity.

Figure 1. Lophelia pertusa reefs at the Hovland Mounds. Note that the large amounts of dead reef are GOOD. The live coral grows on top of the dead skeleton framework so it means this reef has been thriving for thousands of years.

This cruise was lucky to have permission to explore both the Hovland Mounds Special Area of Conservation (SAC) and the Belgica MoundsSAC, the purpose being to record footage of the fauna and determine the habitat heath. It will also feed into future predictive habitat modelling which will give us a better idea of the most probable areas these animals can be found. It does this by forming a relationship between the living organism and the associated environmental variables, such as slope, current speed, etc. Due to the deep sea’s large size and how expensive it is to survey, these models provide a good baseline for planning future biodiscovery projects and for informing conservation policy for the promotion of areas to a protected status. This is an area I am pursuing later in the year at ICBM in the University of Oldenburg, Germany. It is an incredible experience to see these habitats first hand. Areas of interest during this survey include submarine canyons. Submarine canyons are thought to be biodiversity hotspots due to the funnelling of nutrients from the shallow productive environment to the deep sea. The incised walls of the canyon provide steep surfaces for the attachment of corals and sponges, which are of particular interest.  I am looking forward to returning to the Whittard Canyon as last year I gathered sediment cores from the Whittard Canyon to hunt for microplastics.

Figure 2. A murder of venus fly trap anemones (Phelliactis sp.) gathered around the only hard substrate in the area. Referred to as a murder by our chief scientist Dr. Louise Allcock for their voracious appetite.

My role here is to assist all the senior scientists in any way and learn as much as possible. With three chemists ( Dr. Ryan Young, Prof. Olivier Thomas, and Robert Nesbitt), four zoologists (Dr. Louise Allcock our chief scientist, Dr. Claire Laguionie-Marchais, Raissa Hogan, and Morag Taite), and one oceanographer (Eoghan Daly)  on board I have been learning a lot about the deep sea and the animals that inhabit this highly understudied ecosystem.


Figure 3. Decorator crab holding a Paramuricea octocoral. We can still see you!

One of the more intense places onboard is Holland I’s control shack. Here, two pilots and up to three scientists control the ROV. Here one taxonomist and one chemist guide the pilot's route depending on what is interesting. Luckily, there is room for a student as well so I have been aiding with this process. In the shack, time has no meaning. Hours feel like minutes as you are so engrossed in the visuals of the deep-sea ecosystem that anything happening outside that room becomes irrelevant.
Corals and sponges are known to have an interesting chemistry, according to the on-board chemists Ryan, Olivier, and Robert. For this reason, we are collecting samples belonging to these phyla. Any sample that is collected will have genetic and taxonomic work carried out back on shore with the remainder examined for novel compounds. These compounds will hopefully end up in medicines in the future. Bycatch is also not wasted and is quickly preserved for future genetic work. Genetic work is very important to understand the evolution and relationships of these animals and it can identify key features in their past such as population declines or bottlenecks.

Eoghan Daly, a postgraduate student interested in the effects of trawling on seabed rugosity, is using the multibeam onboard. Rugosity is the measure of the roughness of the sediment. Certain corals and sponges have a preference on which type of sediment they grow in so any man-made changes in this composition has wider biodiversity impacts.

Figure 4. Transparent sea cucumbers (Holothurians). As deposit feeders they eat the sediment to extract carbon and nutrients which is passed through their gut…as you can see.


Of course, I have been involved with data logging. Data logging with large amounts of information can become very tricky very fast if not kept on top of. One thing about the ROV is that it’s data heavy.  We get positional data (lat, long, depth) every 10 seconds or so from the USBL system, each 2hr high def video is about 100 Gb, we get video feeds from 3 other cameras, and also have a series of still digital images to process.  This is on top of the data associated with the samples that we collect. Everything needs to be accounted for.  A properly managed data set is the first step to a successful project. This cruise has multiple outcomes and these all use different aspects of the gathered data.

All the skills I learn on board are of great value as I hope to pursue deep-sea research at the University of the Algarve as part of my M.Sc. this September. In particular, I would like to compare biodiversity trends and physical processes in the Whittard Canyon off the wide Irish shelf with that of the Lisbon and Nazaré Canyons which are located near urban bases off the narrow Portuguese shelf.  

By Declan Morrissey

Acknowledgements


I would like to thank Dr Louise Allcock and her excellent crew of scientists for sharing their knowledge and extending the invitation to join them in a fantastic voyage of discovery. 

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